HeteroGraphConv¶

class
dgl.nn.tensorflow.
HeteroGraphConv
(mods, aggregate='sum')[source]¶ Bases:
tensorflow.python.keras.engine.base_layer.Layer
A generic module for computing convolution on heterogeneous graphs.
The heterograph convolution applies submodules on their associating relation graphs, which reads the features from source nodes and writes the updated ones to destination nodes. If multiple relations have the same destination node types, their results are aggregated by the specified method. If the relation graph has no edge, the corresponding module will not be called.
Pseudocode:
outputs = {nty : [] for nty in g.dsttypes} # Apply submodules on their associating relation graphs in parallel for relation in g.canonical_etypes: stype, etype, dtype = relation dstdata = relation_submodule(g[relation], ...) outputs[dtype].append(dstdata) # Aggregate the results for each destination node type rsts = {} for ntype, ntype_outputs in outputs.items(): if len(ntype_outputs) != 0: rsts[ntype] = aggregate(ntype_outputs) return rsts
Examples
Create a heterograph with three types of relations and nodes.
>>> import dgl >>> g = dgl.heterograph({ ... ('user', 'follows', 'user') : edges1, ... ('user', 'plays', 'game') : edges2, ... ('store', 'sells', 'game') : edges3})
Create a
HeteroGraphConv
that applies different convolution modules to different relations. Note that the modules for'follows'
and'plays'
do not share weights.>>> import dgl.nn.pytorch as dglnn >>> conv = dglnn.HeteroGraphConv({ ... 'follows' : dglnn.GraphConv(...), ... 'plays' : dglnn.GraphConv(...), ... 'sells' : dglnn.SAGEConv(...)}, ... aggregate='sum')
Call forward with some
'user'
features. This computes new features for both'user'
and'game'
nodes.>>> import tensorflow as tf >>> h1 = {'user' : tf.random.normal((g.number_of_nodes('user'), 5))} >>> h2 = conv(g, h1) >>> print(h2.keys()) dict_keys(['user', 'game'])
Call forward with both
'user'
and'store'
features. Because both the'plays'
and'sells'
relations will update the'game'
features, their results are aggregated by the specified method (i.e., summation here).>>> f1 = {'user' : ..., 'store' : ...} >>> f2 = conv(g, f1) >>> print(f2.keys()) dict_keys(['user', 'game'])
Call forward with some
'store'
features. This only computes new features for'game'
nodes.>>> g1 = {'store' : ...} >>> g2 = conv(g, g1) >>> print(g2.keys()) dict_keys(['game'])
Call forward with a pair of inputs is allowed and each submodule will also be invoked with a pair of inputs.
>>> x_src = {'user' : ..., 'store' : ...} >>> x_dst = {'user' : ..., 'game' : ...} >>> y_dst = conv(g, (x_src, x_dst)) >>> print(y_dst.keys()) dict_keys(['user', 'game'])
Notes
HeteroGraphConv requires that there is a module for every
'etype'
in an input graph. If you want to apply HeteroGraphConv to a subset of a graph’s'etypes'
, you must create a new graph using for exampleedge_type_subgraph()
. Parameters
mods (dict[str, nn.Module]) – Modules associated with every edge types. The forward function of each module must have a DGLHeteroGraph object as the first argument, and its second argument is either a tensor object representing the node features or a pair of tensor object representing the source and destination node features.
aggregate (str, callable, optional) –
Method for aggregating node features generated by different relations. Allowed string values are ‘sum’, ‘max’, ‘min’, ‘mean’, ‘stack’. The ‘stack’ aggregation is performed along the second dimension, whose order is deterministic. User can also customize the aggregator by providing a callable instance. For example, aggregation by summation is equivalent to the follows:
def my_agg_func(tensors, dsttype): # tensors: is a list of tensors to aggregate # dsttype: string name of the destination node type for which the # aggregation is performed stacked = tf.stack(tensors, axis=0) return tf.reduce_sum(stacked, axis=0)